RNA-Seq of Solanum pennellii SAM + P1 + P2 leaves - SRA

SRX3052815: RNA-Seq of Solanum pennellii SAM + P1 + P2 leaves
1 ILLUMINA (Illumina HiSeq 2500) run: 17.1M spots, 1.7G bases, 832.9Mb downloads

Design: cDNA was amplified from total RNA using Clontech SMARTer kit (634926, TaKaRa Bio USA); cDNA was fragmented using Fragmentase (M0348, NEB) and porcessed for the addition of Illumina TruSeq universal adapters; Libraries were amplified using Phusion HiFi Polymerase mix (M0531, NEB) and pooled to a final library concetration of 20 nM (pools of 8 indexed samples/library).

Submitted by: Donald Danforth Plant Science Center

Study: Leaf thickness patterning in desert tomato

PRJNA396585 • SRP114535 • All experiments • All runs

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Transcriptomes for early consecutive stages of leaf development in two S.pennellii x S. lycopersicum introgression lines with thick leaves to address the question: "How is leaf thickness patterned?".

Sample:

SAMN07429454 • SRS2399163 • All experiments • All runs

Organism: Solanum pennellii

Library:

Name: sp1p1

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: size fractionation

Layout: SINGLE

Runs: 1 run, 17.1M spots, 1.7G bases, 832.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR5886976	17,137,363	1.7G	832.9Mb	2017-08-11

ID:: 4332234

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